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New TOBIOIJ letter

by ivan — last modified 2008-09-18 09:13 PM

A selection method for eliminating species redundancy in clusters of putative orthologous sequences.

Title: The Rainbow Prim Algorithm for Selecting Putative Orthologous Protein Sequences

Authors: Anna Rosa Troisi, Giovanni Aloisio, I. Rossi, P. Fariselli, R. Casadio.

Published on: Bentham's The Open Bioinformatics journal (freely downloadable), vol. 2 (2008), p. 60-63

Abstract
We present a selection method designed for eliminating species redundancy in clusters of putative orthologous sequences, to be applied as a post-processing procedure to pre-clustered data obtained from other methods. The algorithm can always zero-out the cluster redundancy while preserving the number of species of the original cluster

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